---
title: "mbX: A Microbiome Data Cleaning and Visualization Package"
author: "Utsav Lamichhane"
output: rmarkdown::html_vignette
vignette: >
  %\VignetteIndexEntry{mbX Vignette}
  %\VignetteEngine{knitr::rmarkdown}
  %\VignetteEncoding{UTF-8}
---

# Introduction

The `mbX` package provides functions for cleaning and visualizing microbiome data. This vignette demonstrates how to use `ezclean()` and `ezviz()` to transform and visualize your data.

# Data Cleaning with ezclean()

```r
file_mic <- system.file("extdata", "microbiome.csv", package = "mbX")
file_meta <- system.file("extdata", "metadata.csv", package = "mbX")
cleaned_data <- mbX::ezclean(file_mic, file_meta, "genus", 10)
head(cleaned_data)