--- title: "Multiple dispatch based on dataframes" output: rmarkdown::html_vignette vignette: > %\VignetteIndexEntry{Multiple dispatch based on dataframes} %\VignetteEngine{knitr::rmarkdown} %\VignetteEncoding{UTF-8} --- ```{r, include = FALSE} knitr::opts_chunk$set( collapse = TRUE, comment = "#>" ) ``` ```{r setup} library(interfacer) ``` # Rationale The S3 type system allows for dispatch based on the first argument of a function. In the situation where we are developing functions that use dataframes as input selecting a dispatch function needs to be based on the structure of the input rather than its class. `interfacer` can use `iface` specifications to associate # Dispatch Dispatching to one of a number of functions based on the nature of a dataframe input is enabled by `idispatch(...)`. This emulates the behaviour of `S3` classes but for dataframes, based on their columns and also their grouping. Consider the following `iface` specifications: ```{r} i_test = iface( id = integer ~ "an integer ID", test = logical ~ "the test result" ) # Extends the i_test to include an additional column i_test_extn = iface( i_test, extra = character ~ "a new value", .groups = FALSE ) ``` We can create specific handlers for each type of data and decide which function to dispatch to at runtime based on the input dataframe. ```{r} # The generic function disp_example = function(x, ...) { idispatch(x, disp_example.extn = i_test_extn, disp_example.no_extn = i_test ) } # The handler for extended input dataframe types disp_example.extn = function(x = i_test_extn, ...) { message("extended data function") return(colnames(x)) } # The handler for non-extended input dataframe types disp_example.no_extn = function(x = i_test, ...) { message("not extended data function") return(colnames(x)) } ``` If we call `disp_example()` with data that matches the `i_test_extn` specification we get one type of behaviour: ```{r} tmp = tibble::tibble( id=c("1","2","3"), test = c(TRUE,FALSE,TRUE), extra = 1.1 ) tmp %>% disp_example() ``` But if we call `disp_example()` with data that only matches the `i_test` specification we get different behaviour: ```{r} # this matches the i_test_extn specification: tmp2 = tibble::tibble( id=c("1","2","3"), test = c(TRUE,FALSE,TRUE) ) tmp2 %>% disp_example() ``` I've used this mechanism, for example, to configure how plots are produced depending on the input. ## Recursive dispatch The order of the rules is important. In general the more detailed specifications needing to be provided first, and the more generic specifications last. We can leverage this to create a recursive functional pattern of dataframe processing that allows multiple inputs to converge on a single output, this also demonstrates the use of `itest()` which simply checks an input conforms to an `iface` specification: ```{r} # generic type 1 input i_input_1 = iface( x = integer ~ "the positives", n = default(100) + integer ~ "the total" ) # generic type 2 input i_input_2 = iface( p = proportion ~ "the proportion", n = default(100) + integer ~ "the total" ) # more detailed combined type 1 and 2 input i_interim = iface( i_input_1, i_input_2 ) # most detailed input format i_final = iface( i_interim, lower = double ~ "wilson lower CI", upper = double ~ "wilson lower CI", mean = double ~ "wilson mean" ) # final target output format i_target = iface( i_final, label = character ~ "a printable label" ) # processes input of type 1 and process.input_1 = function(x = i_input_1,...) { message("process input 1") ireturn(x %>% dplyr::mutate(p = x/n), iface = i_interim) } process.input_2 = function(x = i_input_2,...) { message("process input 2") ireturn(x %>% dplyr::mutate(x = floor(p*n)), iface = i_interim) } process.interim = function(x) { message("process interim") ireturn(x %>% dplyr::mutate(binom::binom.wilson(x,n)), iface = i_final) } process.final = function(x) { message("process final") ireturn(x %>% dplyr::mutate(label = sprintf("%1.1f%% [%1.1f%% - %1.1f%%] (%d/%d)", mean*100, lower*100, upper*100, x, n)), iface = i_target) } process = function(x,...) { # this test must be at the front to prevent infinite recursion if (itest(x, i_target)) return(x) out = idispatch(x, process.final = i_final, process.interim = i_interim, process.input_2 = i_input_2, process.input_1 = i_input_1 ) return(process(out)) } ``` Processing an input of `type 1` results in one path through the data pipeline: ```{r} # tibble::tibble(x=c(10,30), n=c(NA,50)) %>% itest(i_input_1) process(tibble::tibble(x=c(10,30), n=c(NA,50))) %>% dplyr::glimpse() ``` Processing an input of `type 2`, results in a different path through the data pipeline, but the same outcome: ```{r} # tibble::tibble(p=0.15,n=1000) %>% itest(i_input_2) process(tibble::tibble(p=0.15,n=1000)) %>% dplyr::glimpse() ``` Care must be taken though in this pattern, particularly if you are re-using column names,as data-type coercion could result in some column types being switched backwards and forwards, and other infinite loop problems. ## Grouping based dispatch It is often useful to have a function that can expects a specific grouping but can handle additional groups. One way of handling these is to use `purrr` and nest columns extensively. Nesting data in the unexpected groups and repeatedly applying the function you want. An alternative `dplyr` solution is to use a `group_modify`. `interfacer` leverages this second option to automatically determine a grouping necessary for a pipeline function from the stated grouping requirements and automatically handle them without additional coding in the package. For example if we have the following `iface` the input for a function must be grouped only by the `color` column: ```{r} i_diamond_price = interfacer::iface( color = enum(`D`,`E`,`F`,`G`,`H`,`I`,`J`, .ordered=TRUE) ~ "the color column", price = integer ~ "the price column", .groups = ~ color ) ``` A package developer writing a pipeline function may use this fact to handle possible additional grouping by using a `igroup_process(df, ...)` ```{r} # exported function in package # at param can use `r idocument(ex_mean, df)` for documentation ex_mean = function(df = i_diamond_price, extra_param = ".") { # dispatch based on groupings: igroup_process(df, # the real work of this function is provided as an anonymous inner # function (but can be any other function e.g. package private function) # or a purrr style lambda. function(df, extra_param) { message(extra_param, appendLF = FALSE) return(df %>% dplyr::summarise(mean_price = mean(price))) } ) } ``` If we pass this to correctly grouped data conforming to `i_diamond_price` the inner function is executed once transparently, after the input has been validated: ```{r} # The correctly grouped dataframe ggplot2::diamonds %>% dplyr::group_by(color) %>% ex_mean(extra_param = "without additional groups...") %>% dplyr::glimpse() ``` If on the other hand additional groups are present the inner function is executed once for each of the additional groups. Data validation happens once per group, which affects interpretation of uniqueness. ```{r} # The incorrectly grouped dataframe ggplot2::diamonds %>% dplyr::group_by(cut, color) %>% ex_mean() %>% dplyr::glimpse() ``` The output of this is actually grouped by `cut` as the `color` column grouping is consumed by the nested function in `igroup_process`.