* using log directory 'd:/Rcompile/CRANpkg/local/4.4/Rdistance.Rcheck' * using R version 4.4.3 (2025-02-28 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'Rdistance/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'Rdistance' version '3.0.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'Rdistance' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [7s] OK * checking Rd files ... [1s] NOTE checkRd: (-1) halfnorm.like.Rd:105: Lost braces; missing escapes or markup? 105 | {f(x|a,b,c_1,c_2,...,c_k) = f(x|a,b)(1 + c(1) h_i1(x) + c(2) h_i2(x) + ... + c(k) h_ik(x)). } | ^ checkRd: (-1) secondDeriv.Rd:15: Lost braces 15 | This must be a function of the form FUN <- function(x, ...){...} | ^ * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [5s] ERROR Running examples in 'Rdistance-Ex.R' failed The error most likely occurred in: > ### Name: plot.dfunc > ### Title: plot.dfunc - Plot method for distance (detection) functions > ### Aliases: plot.dfunc > ### Keywords: models > > ### ** Examples > > set.seed(87654) > x <- rnorm(1000, mean=0, sd=20) > x <- x[x >= 0] > x <- units::set_units(x, "ft") > dfunc <- dfuncEstim(x~1, likelihood="halfnorm") > plot(dfunc) > plot(dfunc, nbins=25) > > # showing effects of plot params > plot(dfunc + , col=c("red","blue","orange") + , border="black" + , xlab="Off-transect distance" + , ylab="Prob" + , vertLines = FALSE + , main="Showing plot params") > > plot(dfunc + , col="wheat" + , density=30 + , angle=c(-45,0,45) + , cex.axis=1.5 + , cex.lab=2 + , ylab="Probability") Error in UseMethod("units") : no applicable method for 'units' applied to an object of class "logical" Calls: plot ... barplot.default -> xyrect -> rect -> rbind -> rbind -> units Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [67s] OK * checking PDF version of manual ... [25s] OK * checking HTML version of manual ... [12s] OK * DONE Status: 1 ERROR, 1 NOTE