* using log directory 'd:/Rcompile/CRANpkg/local/4.3/geohabnet.Rcheck' * using R version 4.3.3 (2024-02-29 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'geohabnet/DESCRIPTION' ... OK * this is package 'geohabnet' version '2.1.3' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'geohabnet' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking startup messages can be suppressed ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [6s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [11s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [51s] OK Running 'testthat.R' [50s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [265s] ERROR Error(s) in re-building vignettes: --- re-building 'LinkWeightsAnalysis.Rmd' using rmarkdown trying URL 'https://s3.us-east-2.amazonaws.com/earthstatdata/HarvestedAreaYield175Crops_Indvidual_Geotiff/potato_HarvAreaYield_Geotiff.zip' Content type 'application/zip' length 10812124 bytes (10.3 MB) ================================================== downloaded 10.3 MB --- finished re-building 'LinkWeightsAnalysis.Rmd' --- re-building 'analysis.Rmd' using rmarkdown trying URL 'https://s3.us-east-2.amazonaws.com/earthstatdata/HarvestedAreaYield175Crops_Indvidual_Geotiff/avocado_HarvAreaYield_Geotiff.zip' Content type 'application/zip' length 6271196 bytes (6.0 MB) ================================================== downloaded 6.0 MB trying URL 'https://dataverse.harvard.edu/api/access/datafile/3985008?format=original' Quitting from lines 217-223 [fetch_sp_ba] (analysis.Rmd) Error: processing vignette 'analysis.Rmd' failed with diagnostics: unable to find an inherited method for function 'sources' for signature '"NULL"' --- failed re-building 'analysis.Rmd' SUMMARY: processing the following file failed: 'analysis.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... [9s] OK * DONE Status: 1 ERROR